interesting topics for user group presentation

[Z. Frazier]

We use Python for almost everything at work.  It is a good prototyping/
proof of concept language.  We have an application server written in
Python called Bioverse, which is a tool designed for protein research.  It
is currently tied into a database of 19 genomes, with networks
representing protein interactions.  It can be used to identify the
function of new proteins, and can be used to identify similarities in
network structure which help identify what pathways a protein is involved
in.

the server for the human genome is here:

http://bioverse.compbio.washington.edu:9000/

here are some of the graphs we work with:

http://bioverse.compbio.washington.edu:9000/explore/interaction

sorry if this is a little OT,

-zach

On Sat, 25 Jan 2003, Cere M. Davis wrote:

>
> That sounds great to me actually.  If nothing else, it's good to know that
> there are other UW Python programmers out there.  What kinds of things
> have you used Python for?
>
> On Fri, 24 Jan 2003, Scott Sweeney wrote:
>
> > Date: Fri, 24 Jan 2003 18:53:52 -0800
> > From: Scott Sweeney <ssweens at u.washington.edu>
> > Reply-To: linux at u.washington.edu
> > To: UW Linux Group <linux at u.washington.edu>
> > Subject: RE: interesting topics for user group presentation
> >
> > I was the other who pinged Evan, somehow not seeing your post, Cere.
> > I've used it for a couple projects, but I really enjoy it and might be
> > able to offer some fair insights to anyone whose interested.
> >
> > - Scott Sweeney
> >
> > -----Original Message-----
> > From: LINUX-owner at u.washington.edu [mailto:LINUX-owner at u.washington.edu]
> > On Behalf Of Evan Martin
> > Sent: Thursday, January 23, 2003 11:26 PM
> > To: UW Linux Group
> > Subject: Re: interesting topics for user group presentation
> >
> >
> > On Thu, Jan 23, 2003 at 11:15:09PM -0800, Cere M. Davis wrote:
> > > Finally, someone replied!  Sheesh!
> >
> > The funniest part is, I actually got *two* off-list responses to "it
> > seems that nobody knows Jython" even though you just asked about it a
> > day ago and got no response.  :D
> >
> >
>
> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
> 		        Cere Davis
> 		Unix Systems Administrator - CSDE
>             cere at u.washington.edu   ph: 206.685.5346
>          https://staff.washington.edu/cere
>
> GnuPG Key   http://staff.washington.edu/cere/gpgkey.txt
> Key fingerprint = B63C 2361 3B9B 8599 ECC9  D061 3E48 A832 F455 9E7FA
>
>
>
>